Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855354.1_cds_XP_016512816.1_25422
CDS Infomation

[gene=LOC107829863] [db_xref=GeneID:107829863] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like isoform X2] [protein_id=XP_016512816.1] [location=complement(join(47307..47396,47570..47925,48050..48146,49029..49128,49286..49335,49420..49521,49606..49683,49764..50030,50118..50217,50325..50586,52227..52272))] [gbkey=CDS]
Sequence

ATGAGTGGCAACATGTCAGGACCTCTAGACCGACCATTCAGGCCAAGTCTAGAAAAGATT
GACCTTGAAAACCCCGAGCATGAAAGAAAGACAAGGCTTGGGTCTCTCAAAAAGAAGGCA
GTTAATGCCTCTTCCAAATTTAGACATTCTTTTACAAAAAAAGGCCGAAGAAACAGCAGA
GTCATGTCTGTTGTTTTTGAGGATGAACATGACGCTGAGGAAATAAAGGCAGTTGATGCA
TTCCGTCAAGCACTTATCTTGGAGGAATTGCTTCCTGCAAAGCACGACGATTATCATAAA
ATGCTAAGATTTTTGAAGGCCAGAAAATTTGATATTGAAAAATCAAAGCAAATGTGGGCT
GATATGCTCAAATGGAGGAGCGAATTTGGTGCAGACACTATCATAGAGGATTTCGAGTTC
AAGGAAAAGGAAGAAGTCCTCAAGTATTATCCACAAGGGCATCATGGAGTTGACAAGGAA
GGAAGACCAGTTTATATTGAAAGAATTGGTCAAGTAGATTCCGTCAAGCTCTTGCAAGTT
ACAACGATGGATCGCTATCTCAAGTACCATGTCCAGGAGTTCGAGAGGACCCTCAACGAC
AAGATGCCTGCCTGCTCTATTGCAGCCAAAAAGCACATCGACACAAGCACAACTATTCTT
GATGTACAAGGAGTGGGACTGAAGAGCTTTAACAAATCAGCAAGGGAACTCATTCAATGC
CTTCAAACTATTGATGGTAACAATTATCCTGAGAGCTTGTGTCGTATGTACATTATCAAT
GCTGGTTCTGGATTCAGGCTCTTGTGGAACTCTGTCAAGTCATTCCTCGACCCTAAGACA
ACTGCAAAGATTCATGTTCTTGGTAATAAATATCAGAGCAAGTTGCTTGAAGTAATTGAT
GCCAGTGAGTTGCCAGAGTTCTTAGGTGGTACATGTACTTGTGCTGACAAAGGAGGATGT
ATGCTTTCTGATAAAGGCCCATGGAATGATCAAGATATAATGAAGGTTGGCATGAACAAA
AATTATCCTAGTGCATATGAACCTGAAGACTTTATGCCTATTGTGGACAAGGCAGTTGAT
GTAACTTGGACTAAAGCTAAGAGAGGAGATTTCTTTCCCATACATGATGCTTCTAAGTCA
CCCCAAGGATTTAGCAACCAATTATTCACTGGAGTTTTGACATTAGTAATGGGCATTGTG
ACATTGGTCAAGATGACCCGAAACATGCCAAGGAAGCTTGCTGATGCTACCCTGCAGGCT
CATGGCTACCAGTTAAACGAACCAACTATCTCCGCCAACGAGTACTTCAGCATGATGAAG
CGCATGGAAGAACTCGAGGAGAAGGTCATTACTCTAAGCAACAAGCCTAATGCCTTACCA
CCTGAGAAGGAAGAATTGCTCAATAATGCCATGAAACGAATCGATACTTTGGAGCAAGAT
CTTTGTGCCACTCACAAGGCTCTTGAGCAAGCTCTGGTTCGTCAAGCGGAACTTCTAGCA
TACGTAGAGAAGAAGAGGAAGAAGAAGAAGTTCTTGGGGCTATTTTGA

Peptide Sequence

PEP ID

XP_016512816.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like isoform X2 [Nicotiana tabacum]
Sequence

MSGNMSGPLDRPFRPSLEKIDLENPEHERKTRLGSLKKKAVNASSKFRHSFTKKGRRNSR
VMSVVFEDEHDAEEIKAVDAFRQALILEELLPAKHDDYHKMLRFLKARKFDIEKSKQMWA
DMLKWRSEFGADTIIEDFEFKEKEEVLKYYPQGHHGVDKEGRPVYIERIGQVDSVKLLQV
TTMDRYLKYHVQEFERTLNDKMPACSIAAKKHIDTSTTILDVQGVGLKSFNKSARELIQC
LQTIDGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTAKIHVLGNKYQSKLLEVID
ASELPEFLGGTCTCADKGGCMLSDKGPWNDQDIMKVGMNKNYPSAYEPEDFMPIVDKAVD
VTWTKAKRGDFFPIHDASKSPQGFSNQLFTGVLTLVMGIVTLVKMTRNMPRKLADATLQA
HGYQLNEPTISANEYFSMMKRMEELEEKVITLSNKPNALPPEKEELLNNAMKRIDTLEQD
LCATHKALEQALVRQAELLAYVEKKRKKKKFLGLF

Transcript Sequence

Gene sequence data has not been registered.